Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Gm21470-201ENSMUST00000187680 696 ntBASIC13.85□□□□□ -0.19
Hoxc4Q08624 Gm10766-202ENSMUST00000194123 606 ntBASIC13.85□□□□□ -0.19
Hoxc4Q08624 Gm5425-201ENSMUST00000214125 459 ntBASIC13.85□□□□□ -0.19
Hoxc4Q08624 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hoxc4Q08624 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.84□□□□□ -0.19
Hoxc4Q08624 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.84□□□□□ -0.19
Hoxc4Q08624 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Gm28631-201ENSMUST00000190740 334 ntBASIC13.84□□□□□ -0.19
Hoxc4Q08624 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Gm6218-201ENSMUST00000219812 628 ntBASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc4Q08624 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc4Q08624 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc4Q08624 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc4Q08624 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm42612-201ENSMUST00000197986 623 ntBASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm43170-201ENSMUST00000199827 612 ntBASIC13.83□□□□□ -0.2
Hoxc4Q08624 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm9797-201ENSMUST00000052902 613 ntBASIC13.83□□□□□ -0.2
Hoxc4Q08624 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc4Q08624 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.82□□□□□ -0.2
Hoxc4Q08624 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Gm12859-201ENSMUST00000117834 427 ntBASIC13.82□□□□□ -0.2
Hoxc4Q08624 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hoxc4Q08624 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms