Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.65□□□□□ -0.06
Ebf1Q07802 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ebf1Q07802 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ebf1Q07802 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ebf1Q07802 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ebf1Q07802 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.63□□□□□ -0.07
Ebf1Q07802 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ebf1Q07802 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.63□□□□□ -0.07
Ebf1Q07802 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Gm12859-201ENSMUST00000117834 427 ntBASIC14.63□□□□□ -0.07
Ebf1Q07802 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.63□□□□□ -0.07
Ebf1Q07802 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Shd-206ENSMUST00000225145 998 ntBASIC14.63□□□□□ -0.07
Ebf1Q07802 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.63□□□□□ -0.07
Ebf1Q07802 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.63□□□□□ -0.07
Ebf1Q07802 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ebf1Q07802 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ebf1Q07802 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.62□□□□□ -0.07
Ebf1Q07802 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.62□□□□□ -0.07
Ebf1Q07802 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Gm18187-201ENSMUST00000196476 984 ntBASIC14.62□□□□□ -0.07
Ebf1Q07802 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.62□□□□□ -0.07
Ebf1Q07802 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.62□□□□□ -0.07
Ebf1Q07802 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ebf1Q07802 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms