Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.13□□□□□ -0.15
Col9a1Q05722 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Gm4804-201ENSMUST00000182234 999 ntBASIC14.13□□□□□ -0.15
Col9a1Q05722 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.13□□□□□ -0.15
Col9a1Q05722 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.13□□□□□ -0.15
Col9a1Q05722 Gm37533-201ENSMUST00000193848 545 ntBASIC14.13□□□□□ -0.15
Col9a1Q05722 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Gm17795-201ENSMUST00000214505 757 ntBASIC14.13□□□□□ -0.15
Col9a1Q05722 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.13□□□□□ -0.15
Col9a1Q05722 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.13□□□□□ -0.15
Col9a1Q05722 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col9a1Q05722 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col9a1Q05722 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a1Q05722 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm26474-201ENSMUST00000116762 122 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm5479-201ENSMUST00000160578 435 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Mir6958-201ENSMUST00000184207 73 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm44251-201ENSMUST00000204963 442 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Mir125a-201ENSMUST00000083545 68 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col9a1Q05722 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gm8872-201ENSMUST00000197475 1341 ntBASIC14.12□□□□□ -0.15
Col9a1Q05722 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a1Q05722 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Gm2260-201ENSMUST00000184965 657 ntBASIC14.11□□□□□ -0.15
Col9a1Q05722 Gm33320-201ENSMUST00000192232 530 ntBASIC14.11□□□□□ -0.15
Col9a1Q05722 Gm45118-201ENSMUST00000208928 825 ntBASIC14.11□□□□□ -0.15
Col9a1Q05722 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col9a1Q05722 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.11□□□□□ -0.15
Col9a1Q05722 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.11□□□□□ -0.15
Col9a1Q05722 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a1Q05722 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col9a1Q05722 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.1□□□□□ -0.15
Col9a1Q05722 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col9a1Q05722 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms