Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a2Q02788 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Col6a2Q02788 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col6a2Q02788 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col6a2Q02788 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.43□□□□□ -0.1
Col6a2Q02788 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a2Q02788 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.42□□□□□ -0.1
Col6a2Q02788 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm14767-201ENSMUST00000121559 586 ntBASIC14.42□□□□□ -0.1
Col6a2Q02788 Mir1897-201ENSMUST00000122581 272 ntBASIC14.42□□□□□ -0.1
Col6a2Q02788 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm44344-201ENSMUST00000200287 129 ntBASIC14.42□□□□□ -0.1
Col6a2Q02788 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a2Q02788 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Col6a2Q02788 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a2Q02788 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.41□□□□□ -0.1
Col6a2Q02788 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm27306-201ENSMUST00000183970 107 ntBASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm27631-201ENSMUST00000184163 466 ntBASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm27321-201ENSMUST00000185021 205 ntBASIC14.41□□□□□ -0.1
Col6a2Q02788 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.41□□□□□ -0.1
Col6a2Q02788 Shd-206ENSMUST00000225145 998 ntBASIC14.41□□□□□ -0.1
Col6a2Q02788 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a2Q02788 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms