Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Scn1bP97952 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scn1bP97952 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn1bP97952 Olfr129-201ENSMUST00000122318 993 ntBASIC13.22□□□□□ -0.29
Scn1bP97952 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn1bP97952 Gm25406-201ENSMUST00000157599 105 ntBASIC13.22□□□□□ -0.29
Scn1bP97952 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn1bP97952 Gm27742-201ENSMUST00000184667 60 ntBASIC13.22□□□□□ -0.29
Scn1bP97952 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.22□□□□□ -0.29
Scn1bP97952 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.22□□□□□ -0.29
Scn1bP97952 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.22□□□□□ -0.29
Scn1bP97952 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scn1bP97952 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.21□□□□□ -0.29
Scn1bP97952 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Scn1bP97952 Gm13312-201ENSMUST00000119631 718 ntBASIC13.21□□□□□ -0.29
Scn1bP97952 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Rprl3-201ENSMUST00000157400 290 ntBASIC13.21□□□□□ -0.29
Scn1bP97952 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Scn1bP97952 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn1bP97952 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.21□□□□□ -0.29
Scn1bP97952 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scn1bP97952 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1bP97952 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1bP97952 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1bP97952 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1bP97952 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scn1bP97952 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.2□□□□□ -0.3
Scn1bP97952 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scn1bP97952 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn1bP97952 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scn1bP97952 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm8825-201ENSMUST00000182565 998 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm4518-201ENSMUST00000182638 718 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Gm27704-201ENSMUST00000185094 107 ntBASIC13.2□□□□□ -0.3
Scn1bP97952 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scn1bP97952 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.2□□□□□ -0.3
Scn1bP97952 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms