Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.41□□□□□ -0.42
Smn1P97801 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smn1P97801 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smn1P97801 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smn1P97801 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smn1P97801 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.41□□□□□ -0.42
Smn1P97801 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.4□□□□□ -0.42
Smn1P97801 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.4□□□□□ -0.42
Smn1P97801 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Gm7787-201ENSMUST00000216858 688 ntBASIC12.4□□□□□ -0.42
Smn1P97801 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.4□□□□□ -0.42
Smn1P97801 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.4□□□□□ -0.42
Smn1P97801 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Smn1P97801 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smn1P97801 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Smn1P97801 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smn1P97801 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Smn1P97801 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Smn1P97801 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smn1P97801 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Smn1P97801 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.39□□□□□ -0.43
Smn1P97801 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Smn1P97801 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Smn1P97801 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.39□□□□□ -0.43
Smn1P97801 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Gm18246-201ENSMUST00000221023 728 ntBASIC12.39□□□□□ -0.43
Smn1P97801 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Smn1P97801 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Smn1P97801 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Smn1P97801 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.38□□□□□ -0.43
Smn1P97801 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.38□□□□□ -0.43
Smn1P97801 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.38□□□□□ -0.43
Smn1P97801 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.38□□□□□ -0.43
Smn1P97801 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smn1P97801 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms