Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.32□□□□□ -0.28
Cacna1aP97445 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Gm33320-201ENSMUST00000192232 530 ntBASIC13.32□□□□□ -0.28
Cacna1aP97445 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.32□□□□□ -0.28
Cacna1aP97445 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cacna1aP97445 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1aP97445 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm10766-202ENSMUST00000194123 606 ntBASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm37466-201ENSMUST00000195692 652 ntBASIC13.31□□□□□ -0.28
Cacna1aP97445 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm7593-201ENSMUST00000187246 644 ntBASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.31□□□□□ -0.28
Cacna1aP97445 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cacna1aP97445 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.31□□□□□ -0.28
Cacna1aP97445 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm12390-201ENSMUST00000117897 397 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm12341-201ENSMUST00000119724 503 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm27731-201ENSMUST00000185192 107 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm14723-201ENSMUST00000118686 215 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Gm27243-201ENSMUST00000183964 521 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.3□□□□□ -0.28
Cacna1aP97445 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.3□□□□□ -0.28
Cacna1aP97445 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cacna1aP97445 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cacna1aP97445 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms