Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm13813-201ENSMUST00000120998 787 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.63□□□□□ -0.87
PrkdcP97313 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
PrkdcP97313 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 AC093043.3-201ENSMUST00000226531 2273 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
PrkdcP97313 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm11222-201ENSMUST00000119005 738 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm45770-201ENSMUST00000212105 616 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm43081-201ENSMUST00000199082 1380 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC9.63□□□□□ -0.87
PrkdcP97313 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm13570-201ENSMUST00000140763 309 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm18212-201ENSMUST00000211678 889 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
PrkdcP97313 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
PrkdcP97313 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.63□□□□□ -0.87
PrkdcP97313 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PrkdcP97313 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Gm14780-201ENSMUST00000118387 2737 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.62□□□□□ -0.87
PrkdcP97313 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Gm3890-201ENSMUST00000182416 207 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Gm9540-201ENSMUST00000188230 478 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Gm4607-201ENSMUST00000206649 577 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
PrkdcP97313 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
PrkdcP97313 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Gm10752-201ENSMUST00000218348 729 ntBASIC9.62□□□□□ -0.87
PrkdcP97313 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
PrkdcP97313 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
PrkdcP97313 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
PrkdcP97313 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
PrkdcP97313 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms