Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC23.2■■□□□ 1.3
Cux2P70298 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC23.2■■□□□ 1.3
Cux2P70298 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Gm4935-201ENSMUST00000221316 1198 ntBASIC23.2■■□□□ 1.3
Cux2P70298 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cux2P70298 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC23.2■■□□□ 1.3
Cux2P70298 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cux2P70298 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC23.19■■□□□ 1.3
Cux2P70298 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Cux2P70298 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC23.19■■□□□ 1.3
Cux2P70298 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cux2P70298 Gm5637-201ENSMUST00000153890 1119 ntBASIC23.19■■□□□ 1.3
Cux2P70298 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Cux2P70298 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC23.19■■□□□ 1.3
Cux2P70298 Rps4l-202ENSMUST00000204242 789 ntBASIC23.19■■□□□ 1.3
Cux2P70298 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Cux2P70298 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Gm43289-201ENSMUST00000200537 1475 ntBASIC23.19■■□□□ 1.3
Cux2P70298 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cux2P70298 Gm9109-201ENSMUST00000120254 1405 ntBASIC23.18■■□□□ 1.3
Cux2P70298 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cux2P70298 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cux2P70298 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC23.18■■□□□ 1.3
Cux2P70298 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cux2P70298 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC23.18■■□□□ 1.3
Cux2P70298 Gm37497-201ENSMUST00000195830 798 ntBASIC23.18■■□□□ 1.3
Cux2P70298 Gm6082-201ENSMUST00000215204 454 ntBASIC23.18■■□□□ 1.3
Cux2P70298 Itm2b-204ENSMUST00000228637 783 ntBASIC23.18■■□□□ 1.3
Cux2P70298 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC23.18■■□□□ 1.3
Cux2P70298 Ccdc166-201ENSMUST00000182172 2584 ntBASIC23.18■■□□□ 1.3
Cux2P70298 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cux2P70298 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC23.17■■□□□ 1.3
Cux2P70298 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC23.17■■□□□ 1.3
Cux2P70298 AC073947.2-201ENSMUST00000215888 1130 ntBASIC23.17■■□□□ 1.3
Cux2P70298 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Cux2P70298 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Cux2P70298 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC23.17■■□□□ 1.3
Cux2P70298 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cux2P70298 Gm42900-201ENSMUST00000197184 2167 ntBASIC23.17■■□□□ 1.3
Cux2P70298 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cux2P70298 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC23.16■■□□□ 1.3
Cux2P70298 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Gm43138-201ENSMUST00000199123 708 ntBASIC23.16■■□□□ 1.3
Cux2P70298 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cux2P70298 Gm13369-201ENSMUST00000119442 987 ntBASIC23.16■■□□□ 1.3
Cux2P70298 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Gm14381-201ENSMUST00000122105 414 ntBASIC23.16■■□□□ 1.3
Cux2P70298 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC23.16■■□□□ 1.3
Cux2P70298 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cux2P70298 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC23.16■■□□□ 1.3
Cux2P70298 Gm2824-203ENSMUST00000226189 1228 ntBASIC23.16■■□□□ 1.3
Cux2P70298 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cux2P70298 Gm10461-201ENSMUST00000202073 4786 ntBASIC23.16■■□□□ 1.3
Cux2P70298 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cux2P70298 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cux2P70298 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cux2P70298 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Cux2P70298 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms