Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Pdlim4P70271 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pdlim4P70271 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pdlim4P70271 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim4P70271 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.04□□□□□ -0.48
Pdlim4P70271 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm20553-201ENSMUST00000204205 844 ntBASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim4P70271 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.04□□□□□ -0.48
Pdlim4P70271 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.04□□□□□ -0.48
Pdlim4P70271 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim4P70271 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim4P70271 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.03□□□□□ -0.48
Pdlim4P70271 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Gm11745-201ENSMUST00000121669 448 ntBASIC12.03□□□□□ -0.48
Pdlim4P70271 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim4P70271 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim4P70271 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Pdlim4P70271 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.02□□□□□ -0.48
Pdlim4P70271 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.02□□□□□ -0.48
Pdlim4P70271 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.48
Pdlim4P70271 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Pdlim4P70271 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim4P70271 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms