Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.05□□□□□ -0.48
Lsm5P62322 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lsm5P62322 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lsm5P62322 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.04□□□□□ -0.48
Lsm5P62322 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Gm10013-201ENSMUST00000106074 672 ntBASIC12.04□□□□□ -0.48
Lsm5P62322 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm5P62322 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Gm4459-201ENSMUST00000118750 468 ntBASIC12.04□□□□□ -0.48
Lsm5P62322 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm5P62322 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm5P62322 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.04□□□□□ -0.48
Lsm5P62322 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Gm45328-201ENSMUST00000210942 917 ntBASIC12.04□□□□□ -0.48
Lsm5P62322 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.04□□□□□ -0.48
Lsm5P62322 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lsm5P62322 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm5P62322 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.03□□□□□ -0.48
Lsm5P62322 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm5P62322 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm5P62322 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm5P62322 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.03□□□□□ -0.48
Lsm5P62322 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Lsm5P62322 Gm15358-201ENSMUST00000119249 520 ntBASIC12.03□□□□□ -0.48
Lsm5P62322 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Gm11950-201ENSMUST00000121615 838 ntBASIC12.03□□□□□ -0.48
Lsm5P62322 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm5P62322 Gm29257-201ENSMUST00000186115 639 ntBASIC12.03□□□□□ -0.48
Lsm5P62322 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm5P62322 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm5P62322 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm5P62322 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm5P62322 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm5P62322 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm5P62322 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm5P62322 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm5P62322 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm5P62322 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm5P62322 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Lsm5P62322 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm5P62322 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm5P62322 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lsm5P62322 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.02□□□□□ -0.49
Lsm5P62322 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm5P62322 Gm6345-202ENSMUST00000180900 204 ntBASIC12.02□□□□□ -0.49
Lsm5P62322 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.02□□□□□ -0.49
Lsm5P62322 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms