Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.69□□□□□ -0.38
Lsm6P62313 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.69□□□□□ -0.38
Lsm6P62313 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.69□□□□□ -0.38
Lsm6P62313 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Gm5264-201ENSMUST00000190584 848 ntBASIC12.69□□□□□ -0.38
Lsm6P62313 AW822252-206ENSMUST00000208904 237 ntBASIC12.69□□□□□ -0.38
Lsm6P62313 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.69□□□□□ -0.38
Lsm6P62313 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lsm6P62313 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm6P62313 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.68□□□□□ -0.38
Lsm6P62313 Gm8000-201ENSMUST00000188378 592 ntBASIC12.68□□□□□ -0.38
Lsm6P62313 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.68□□□□□ -0.38
Lsm6P62313 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.68□□□□□ -0.38
Lsm6P62313 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm6P62313 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Lsm6P62313 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Lsm6P62313 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lsm6P62313 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.68□□□□□ -0.38
Lsm6P62313 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Lsm6P62313 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.67□□□□□ -0.38
Lsm6P62313 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.67□□□□□ -0.38
Lsm6P62313 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Gm10275-202ENSMUST00000168697 495 ntBASIC12.67□□□□□ -0.38
Lsm6P62313 Gm27525-201ENSMUST00000184465 107 ntBASIC12.67□□□□□ -0.38
Lsm6P62313 Gm43514-201ENSMUST00000198852 424 ntBASIC12.67□□□□□ -0.38
Lsm6P62313 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Gm10275-201ENSMUST00000092620 635 ntBASIC12.67□□□□□ -0.38
Lsm6P62313 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lsm6P62313 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm6P62313 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms