Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Matn2-206ENSMUST00000228570 2798 ntBASIC12.76□□□□□ -0.37
Sec61a1P61620 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.76□□□□□ -0.37
Sec61a1P61620 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.76□□□□□ -0.37
Sec61a1P61620 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Gm14494-201ENSMUST00000118786 435 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.75□□□□□ -0.37
Sec61a1P61620 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sec61a1P61620 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 Gm9682-201ENSMUST00000197505 556 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.75□□□□□ -0.37
Sec61a1P61620 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sec61a1P61620 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.75□□□□□ -0.37
Sec61a1P61620 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sec61a1P61620 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sec61a1P61620 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.75□□□□□ -0.37
Sec61a1P61620 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sec61a1P61620 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sec61a1P61620 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.74□□□□□ -0.37
Sec61a1P61620 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms