Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 AC162938.1-201ENSMUST00000213140 2323 ntBASIC19.4■□□□□ 0.7
Nphp4P59240 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nphp4P59240 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.4■□□□□ 0.7
Nphp4P59240 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.39■□□□□ 0.69
Nphp4P59240 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nphp4P59240 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Gm5912-201ENSMUST00000122282 1438 ntBASIC19.39■□□□□ 0.69
Nphp4P59240 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Gm11524-201ENSMUST00000119349 807 ntBASIC19.39■□□□□ 0.69
Nphp4P59240 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.39■□□□□ 0.69
Nphp4P59240 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 CT030704.2-201ENSMUST00000228887 494 ntBASIC19.39■□□□□ 0.69
Nphp4P59240 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nphp4P59240 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Nphp4P59240 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.38■□□□□ 0.69
Nphp4P59240 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Gm8927-201ENSMUST00000181978 981 ntBASIC19.38■□□□□ 0.69
Nphp4P59240 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Gm5035-201ENSMUST00000215581 927 ntBASIC19.38■□□□□ 0.69
Nphp4P59240 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Gm3222-201ENSMUST00000071282 990 ntBASIC19.38■□□□□ 0.69
Nphp4P59240 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nphp4P59240 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nphp4P59240 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Nphp4P59240 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.37■□□□□ 0.69
Nphp4P59240 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Gm18187-201ENSMUST00000196476 984 ntBASIC19.37■□□□□ 0.69
Nphp4P59240 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.37■□□□□ 0.69
Nphp4P59240 Gm8463-201ENSMUST00000208573 613 ntBASIC19.37■□□□□ 0.69
Nphp4P59240 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nphp4P59240 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nphp4P59240 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nphp4P59240 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Gm15806-201ENSMUST00000120696 955 ntBASIC19.36■□□□□ 0.69
Nphp4P59240 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Gm24420-201ENSMUST00000176676 59 ntBASIC19.36■□□□□ 0.69
Nphp4P59240 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.36■□□□□ 0.69
Nphp4P59240 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.36■□□□□ 0.69
Nphp4P59240 AC156560.2-201ENSMUST00000221232 264 ntBASIC19.36■□□□□ 0.69
Nphp4P59240 AC149294.4-201ENSMUST00000227870 882 ntBASIC19.36■□□□□ 0.69
Nphp4P59240 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms