Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.66□□□□□ -0.22
Nup43P59235 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
Nup43P59235 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nup43P59235 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Gm9824-201ENSMUST00000178707 561 ntBASIC13.66□□□□□ -0.22
Nup43P59235 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.66□□□□□ -0.22
Nup43P59235 Gm18049-201ENSMUST00000208909 581 ntBASIC13.66□□□□□ -0.22
Nup43P59235 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.66□□□□□ -0.22
Nup43P59235 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup43P59235 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nup43P59235 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Nup43P59235 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Nup43P59235 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.66□□□□□ -0.22
Nup43P59235 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup43P59235 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nup43P59235 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup43P59235 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Nup43P59235 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nup43P59235 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Nup43P59235 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.65□□□□□ -0.22
Nup43P59235 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nup43P59235 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Nup43P59235 Gm23547-201ENSMUST00000158210 271 ntBASIC13.65□□□□□ -0.22
Nup43P59235 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.65□□□□□ -0.22
Nup43P59235 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.65□□□□□ -0.22
Nup43P59235 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nup43P59235 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nup43P59235 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nup43P59235 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup43P59235 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nup43P59235 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.64□□□□□ -0.23
Nup43P59235 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.64□□□□□ -0.23
Nup43P59235 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.64□□□□□ -0.23
Nup43P59235 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.64□□□□□ -0.23
Nup43P59235 Gm12134-201ENSMUST00000122109 520 ntBASIC13.64□□□□□ -0.23
Nup43P59235 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nup43P59235 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Gm10253-201ENSMUST00000194270 940 ntBASIC13.64□□□□□ -0.23
Nup43P59235 Gm7774-201ENSMUST00000200064 533 ntBASIC13.64□□□□□ -0.23
Nup43P59235 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.64□□□□□ -0.23
Nup43P59235 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nup43P59235 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.64□□□□□ -0.23
Nup43P59235 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nup43P59235 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nup43P59235 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nup43P59235 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nup43P59235 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms