Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sssca1P56873 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sssca1P56873 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sssca1P56873 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.7□□□□□ -0.54
Sssca1P56873 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.7□□□□□ -0.54
Sssca1P56873 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sssca1P56873 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sssca1P56873 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm25990-201ENSMUST00000102440 86 ntBASIC11.69□□□□□ -0.54
Sssca1P56873 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sssca1P56873 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.69□□□□□ -0.54
Sssca1P56873 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm18246-201ENSMUST00000221023 728 ntBASIC11.69□□□□□ -0.54
Sssca1P56873 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.69□□□□□ -0.54
Sssca1P56873 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sssca1P56873 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.69□□□□□ -0.54
Sssca1P56873 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.69□□□□□ -0.54
Sssca1P56873 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sssca1P56873 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.68□□□□□ -0.54
Sssca1P56873 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Sssca1P56873 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.68□□□□□ -0.54
Sssca1P56873 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.68□□□□□ -0.54
Sssca1P56873 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.68□□□□□ -0.54
Sssca1P56873 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Sssca1P56873 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sssca1P56873 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms