Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.16■□□□□ 0.34
Irf5P56477 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Irf5P56477 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Irf5P56477 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.16■□□□□ 0.34
Irf5P56477 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.16■□□□□ 0.34
Irf5P56477 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Irf5P56477 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.16■□□□□ 0.34
Irf5P56477 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.16■□□□□ 0.34
Irf5P56477 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Irf5P56477 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Irf5P56477 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Gm14127-201ENSMUST00000117906 678 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.15■□□□□ 0.34
Irf5P56477 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Irf5P56477 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Gm44882-201ENSMUST00000205702 802 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Irf5P56477 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.15■□□□□ 0.34
Irf5P56477 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Irf5P56477 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.15■□□□□ 0.34
Irf5P56477 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Gm43570-201ENSMUST00000199951 3688 ntBASIC17.15■□□□□ 0.34
Irf5P56477 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Irf5P56477 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Irf5P56477 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Gm8410-201ENSMUST00000117225 605 ntBASIC17.14■□□□□ 0.33
Irf5P56477 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Gm27920-201ENSMUST00000183953 96 ntBASIC17.14■□□□□ 0.33
Irf5P56477 Gm29541-201ENSMUST00000191351 678 ntBASIC17.14■□□□□ 0.33
Irf5P56477 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.14■□□□□ 0.33
Irf5P56477 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Irf5P56477 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Irf5P56477 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Irf5P56477 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Irf5P56477 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.13■□□□□ 0.33
Irf5P56477 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Gm28630-201ENSMUST00000187806 498 ntBASIC17.13■□□□□ 0.33
Irf5P56477 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Irf5P56477 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.13■□□□□ 0.33
Irf5P56477 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf5P56477 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms