Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.3■□□□□ 0.2
Rrp1P56183 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.3■□□□□ 0.2
Rrp1P56183 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.3■□□□□ 0.2
Rrp1P56183 Gm9182-201ENSMUST00000217829 639 ntBASIC16.3■□□□□ 0.2
Rrp1P56183 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rrp1P56183 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.3■□□□□ 0.2
Rrp1P56183 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrp1P56183 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rrp1P56183 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.29■□□□□ 0.2
Rrp1P56183 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rrp1P56183 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Rrp1P56183 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Rrp1P56183 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.29■□□□□ 0.2
Rrp1P56183 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.29■□□□□ 0.2
Rrp1P56183 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Gm37230-201ENSMUST00000194491 818 ntBASIC16.29■□□□□ 0.2
Rrp1P56183 Gm2651-201ENSMUST00000203560 838 ntBASIC16.29■□□□□ 0.2
Rrp1P56183 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.29■□□□□ 0.2
Rrp1P56183 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.29■□□□□ 0.2
Rrp1P56183 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rrp1P56183 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rrp1P56183 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.28■□□□□ 0.2
Rrp1P56183 Gm8584-201ENSMUST00000171982 758 ntBASIC16.28■□□□□ 0.2
Rrp1P56183 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Mir5131-201ENSMUST00000175426 93 ntBASIC16.28■□□□□ 0.2
Rrp1P56183 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.28■□□□□ 0.2
Rrp1P56183 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.28■□□□□ 0.2
Rrp1P56183 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.28■□□□□ 0.2
Rrp1P56183 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rrp1P56183 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rrp1P56183 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp1P56183 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp1P56183 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rrp1P56183 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp1P56183 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
Rrp1P56183 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.27■□□□□ 0.2
Rrp1P56183 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp1P56183 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp1P56183 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Rrp1P56183 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rrp1P56183 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms