Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.96■□□□□ 0.14
Brca1P48754 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.96■□□□□ 0.14
Brca1P48754 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.96■□□□□ 0.14
Brca1P48754 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.14
Brca1P48754 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.96■□□□□ 0.14
Brca1P48754 Gm45930-201ENSMUST00000221330 292 ntBASIC15.96■□□□□ 0.14
Brca1P48754 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.96■□□□□ 0.14
Brca1P48754 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Brca1P48754 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.95■□□□□ 0.14
Brca1P48754 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.95■□□□□ 0.14
Brca1P48754 Mir7070-201ENSMUST00000183657 86 ntBASIC15.95■□□□□ 0.14
Brca1P48754 Gm7783-201ENSMUST00000204795 781 ntBASIC15.95■□□□□ 0.14
Brca1P48754 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Brca1P48754 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Brca1P48754 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Brca1P48754 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Brca1P48754 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.94■□□□□ 0.14
Brca1P48754 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.94■□□□□ 0.14
Brca1P48754 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.94■□□□□ 0.14
Brca1P48754 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.94■□□□□ 0.14
Brca1P48754 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Brca1P48754 Gm18473-201ENSMUST00000220543 868 ntBASIC15.94■□□□□ 0.14
Brca1P48754 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Brca1P48754 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.94■□□□□ 0.14
Brca1P48754 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Brca1P48754 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.94■□□□□ 0.14
Brca1P48754 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Brca1P48754 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Brca1P48754 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.94■□□□□ 0.14
Brca1P48754 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.94■□□□□ 0.14
Brca1P48754 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.94■□□□□ 0.14
Brca1P48754 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Brca1P48754 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.93■□□□□ 0.14
Brca1P48754 Gm16177-201ENSMUST00000120728 718 ntBASIC15.93■□□□□ 0.14
Brca1P48754 Gm37259-201ENSMUST00000193903 849 ntBASIC15.93■□□□□ 0.14
Brca1P48754 Gm38341-201ENSMUST00000195357 515 ntBASIC15.93■□□□□ 0.14
Brca1P48754 Gm37466-201ENSMUST00000195692 652 ntBASIC15.93■□□□□ 0.14
Brca1P48754 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Brca1P48754 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.93■□□□□ 0.14
Brca1P48754 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Brca1P48754 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Brca1P48754 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Brca1P48754 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Brca1P48754 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.92■□□□□ 0.14
Brca1P48754 Gm2445-201ENSMUST00000182798 989 ntBASIC15.92■□□□□ 0.14
Brca1P48754 Gm27516-201ENSMUST00000184237 98 ntBASIC15.92■□□□□ 0.14
Brca1P48754 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.92■□□□□ 0.14
Brca1P48754 Gm38266-201ENSMUST00000194931 421 ntBASIC15.92■□□□□ 0.14
Brca1P48754 Gm24526-201ENSMUST00000082921 158 ntBASIC15.92■□□□□ 0.14
Brca1P48754 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.92■□□□□ 0.14
Brca1P48754 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Brca1P48754 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Brca1P48754 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.92■□□□□ 0.14
Brca1P48754 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Brca1P48754 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Brca1P48754 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Brca1P48754 Gm12384-201ENSMUST00000119228 919 ntBASIC15.91■□□□□ 0.14
Brca1P48754 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Brca1P48754 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Brca1P48754 Gm24420-201ENSMUST00000176676 59 ntBASIC15.91■□□□□ 0.14
Brca1P48754 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.91■□□□□ 0.14
Brca1P48754 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Brca1P48754 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms