Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sox2P48432 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Sox2P48432 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox2P48432 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox2P48432 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Sox2P48432 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Sox2P48432 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox2P48432 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox2P48432 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox2P48432 Gm7787-201ENSMUST00000216858 688 ntBASIC13.55□□□□□ -0.24
Sox2P48432 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox2P48432 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox2P48432 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox2P48432 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sox2P48432 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox2P48432 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.54□□□□□ -0.24
Sox2P48432 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sox2P48432 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox2P48432 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.54□□□□□ -0.24
Sox2P48432 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.54□□□□□ -0.24
Sox2P48432 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Gm18246-201ENSMUST00000221023 728 ntBASIC13.54□□□□□ -0.24
Sox2P48432 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox2P48432 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.54□□□□□ -0.24
Sox2P48432 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.54□□□□□ -0.24
Sox2P48432 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms