Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfx3P48381 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Rfx3P48381 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.07□□□□□ -0.32
Rfx3P48381 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.07□□□□□ -0.32
Rfx3P48381 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.07□□□□□ -0.32
Rfx3P48381 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Rfx3P48381 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfx3P48381 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.06□□□□□ -0.32
Rfx3P48381 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rfx3P48381 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rfx3P48381 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.06□□□□□ -0.32
Rfx3P48381 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.06□□□□□ -0.32
Rfx3P48381 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.06□□□□□ -0.32
Rfx3P48381 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.06□□□□□ -0.32
Rfx3P48381 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.06□□□□□ -0.32
Rfx3P48381 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Rfx3P48381 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.06□□□□□ -0.32
Rfx3P48381 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rfx3P48381 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfx3P48381 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.05□□□□□ -0.32
Rfx3P48381 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rfx3P48381 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Rfx3P48381 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.05□□□□□ -0.32
Rfx3P48381 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.05□□□□□ -0.32
Rfx3P48381 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.05□□□□□ -0.32
Rfx3P48381 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.05□□□□□ -0.32
Rfx3P48381 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.05□□□□□ -0.32
Rfx3P48381 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.05□□□□□ -0.32
Rfx3P48381 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.05□□□□□ -0.32
Rfx3P48381 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.05□□□□□ -0.32
Rfx3P48381 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rfx3P48381 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfx3P48381 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfx3P48381 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms