Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.69□□□□□ -0.06
Vps4bP46467 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps4bP46467 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.69□□□□□ -0.06
Vps4bP46467 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps4bP46467 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4bP46467 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps4bP46467 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps4bP46467 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Thap2-203ENSMUST00000218989 527 ntBASIC14.68□□□□□ -0.06
Vps4bP46467 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vps4bP46467 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vps4bP46467 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4bP46467 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps4bP46467 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.68□□□□□ -0.06
Vps4bP46467 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps4bP46467 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps4bP46467 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Gm13597-201ENSMUST00000121239 375 ntBASIC14.67□□□□□ -0.06
Vps4bP46467 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps4bP46467 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps4bP46467 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps4bP46467 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4bP46467 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Vps4bP46467 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps4bP46467 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps4bP46467 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Vps4bP46467 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Gm23935-201ENSMUST00000102303 57 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Gm24270-201ENSMUST00000102326 57 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Gm16198-201ENSMUST00000118766 670 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Gm24245-201ENSMUST00000157318 57 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps4bP46467 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.66□□□□□ -0.06
Vps4bP46467 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps4bP46467 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.66□□□□□ -0.06
Vps4bP46467 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms