Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox18P43680 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.87□□□□□ -0.19
Sox18P43680 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sox18P43680 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox18P43680 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.86□□□□□ -0.19
Sox18P43680 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.86□□□□□ -0.19
Sox18P43680 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.86□□□□□ -0.19
Sox18P43680 Gm23958-201ENSMUST00000157207 105 ntBASIC13.86□□□□□ -0.19
Sox18P43680 Gm5479-201ENSMUST00000160578 435 ntBASIC13.86□□□□□ -0.19
Sox18P43680 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.86□□□□□ -0.19
Sox18P43680 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox18P43680 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.86□□□□□ -0.19
Sox18P43680 Gm27631-201ENSMUST00000184163 466 ntBASIC13.86□□□□□ -0.19
Sox18P43680 Gm42693-201ENSMUST00000196779 631 ntBASIC13.86□□□□□ -0.19
Sox18P43680 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sox18P43680 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sox18P43680 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sox18P43680 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.86□□□□□ -0.19
Sox18P43680 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Sox18P43680 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sox18P43680 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sox18P43680 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox18P43680 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.85□□□□□ -0.19
Sox18P43680 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox18P43680 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Gm12390-201ENSMUST00000117897 397 ntBASIC13.85□□□□□ -0.19
Sox18P43680 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.85□□□□□ -0.19
Sox18P43680 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.85□□□□□ -0.19
Sox18P43680 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Sox18P43680 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.85□□□□□ -0.19
Sox18P43680 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Gm45696-201ENSMUST00000212088 985 ntBASIC13.85□□□□□ -0.19
Sox18P43680 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Sox18P43680 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Sox18P43680 Gm10478-201ENSMUST00000084451 396 ntBASIC13.85□□□□□ -0.19
Sox18P43680 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sox18P43680 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.85□□□□□ -0.19
Sox18P43680 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Sox18P43680 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sox18P43680 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox18P43680 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sox18P43680 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox18P43680 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sox18P43680 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sox18P43680 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sox18P43680 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.84□□□□□ -0.19
Sox18P43680 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.84□□□□□ -0.19
Sox18P43680 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Sox18P43680 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.84□□□□□ -0.19
Sox18P43680 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox18P43680 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sox18P43680 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.84□□□□□ -0.19
Sox18P43680 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms