Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.97□□□□□ -0.17
Tnfsf4P43488 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.97□□□□□ -0.17
Tnfsf4P43488 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfsf4P43488 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tnfsf4P43488 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Gm13597-201ENSMUST00000121239 375 ntBASIC13.96□□□□□ -0.17
Tnfsf4P43488 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Gm16026-204ENSMUST00000162652 683 ntBASIC13.96□□□□□ -0.17
Tnfsf4P43488 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Gm28659-201ENSMUST00000188013 759 ntBASIC13.96□□□□□ -0.17
Tnfsf4P43488 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.96□□□□□ -0.17
Tnfsf4P43488 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfsf4P43488 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Tnfsf4P43488 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.95□□□□□ -0.18
Tnfsf4P43488 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.95□□□□□ -0.18
Tnfsf4P43488 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.95□□□□□ -0.18
Tnfsf4P43488 Gm10154-201ENSMUST00000084445 354 ntBASIC13.95□□□□□ -0.18
Tnfsf4P43488 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms