Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.78■□□□□ 0.44
Nkx1-2P42580 Gm10154-201ENSMUST00000084445 354 ntBASIC17.78■□□□□ 0.44
Nkx1-2P42580 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.78■□□□□ 0.44
Nkx1-2P42580 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nkx1-2P42580 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Grk6-205ENSMUST00000224653 2976 ntBASIC17.77■□□□□ 0.44
Nkx1-2P42580 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.77■□□□□ 0.44
Nkx1-2P42580 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Gm2451-201ENSMUST00000199447 999 ntBASIC17.77■□□□□ 0.44
Nkx1-2P42580 Gm10290-201ENSMUST00000200451 999 ntBASIC17.77■□□□□ 0.44
Nkx1-2P42580 Mzt1-203ENSMUST00000227948 952 ntBASIC17.77■□□□□ 0.44
Nkx1-2P42580 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nkx1-2P42580 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Nkx1-2P42580 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx1-2P42580 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx1-2P42580 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx1-2P42580 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx1-2P42580 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.76■□□□□ 0.43
Nkx1-2P42580 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Olfr286-202ENSMUST00000205305 969 ntBASIC17.76■□□□□ 0.43
Nkx1-2P42580 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.76■□□□□ 0.43
Nkx1-2P42580 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.76■□□□□ 0.43
Nkx1-2P42580 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-2P42580 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.75■□□□□ 0.43
Nkx1-2P42580 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Gm14140-201ENSMUST00000119999 995 ntBASIC17.75■□□□□ 0.43
Nkx1-2P42580 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Gm18733-201ENSMUST00000173950 856 ntBASIC17.75■□□□□ 0.43
Nkx1-2P42580 Thap2-203ENSMUST00000218989 527 ntBASIC17.75■□□□□ 0.43
Nkx1-2P42580 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-2P42580 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-2P42580 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms