Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Sox6P40645 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox6P40645 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Sox6P40645 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox6P40645 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Gm1401-201ENSMUST00000122048 772 ntBASIC13.6□□□□□ -0.23
Sox6P40645 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.6□□□□□ -0.23
Sox6P40645 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox6P40645 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox6P40645 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.6□□□□□ -0.23
Sox6P40645 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sox6P40645 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.6□□□□□ -0.23
Sox6P40645 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.6□□□□□ -0.23
Sox6P40645 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.6□□□□□ -0.23
Sox6P40645 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox6P40645 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.6□□□□□ -0.23
Sox6P40645 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sox6P40645 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox6P40645 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox6P40645 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox6P40645 Gm18206-201ENSMUST00000207027 926 ntBASIC13.59□□□□□ -0.23
Sox6P40645 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.59□□□□□ -0.23
Sox6P40645 Psmb5-202ENSMUST00000227257 622 ntBASIC13.59□□□□□ -0.23
Sox6P40645 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.59□□□□□ -0.23
Sox6P40645 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox6P40645 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Sox6P40645 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox6P40645 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.59□□□□□ -0.23
Sox6P40645 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.59□□□□□ -0.23
Sox6P40645 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox6P40645 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox6P40645 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Sox6P40645 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sox6P40645 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.58□□□□□ -0.24
Sox6P40645 Gm14140-201ENSMUST00000119999 995 ntBASIC13.58□□□□□ -0.24
Sox6P40645 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Gm6443-201ENSMUST00000203599 874 ntBASIC13.58□□□□□ -0.24
Sox6P40645 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sox6P40645 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.58□□□□□ -0.24
Sox6P40645 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox6P40645 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.57□□□□□ -0.24
Sox6P40645 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.57□□□□□ -0.24
Sox6P40645 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms