Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.02□□□□□ -0.16
TfamP40630 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.02□□□□□ -0.16
TfamP40630 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.02□□□□□ -0.16
TfamP40630 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TfamP40630 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TfamP40630 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.02□□□□□ -0.16
TfamP40630 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TfamP40630 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Gm16198-201ENSMUST00000118766 670 ntBASIC14.02□□□□□ -0.17
TfamP40630 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Gm16026-204ENSMUST00000162652 683 ntBASIC14.02□□□□□ -0.17
TfamP40630 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.02□□□□□ -0.17
TfamP40630 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.02□□□□□ -0.17
TfamP40630 Gm2451-201ENSMUST00000199447 999 ntBASIC14.02□□□□□ -0.17
TfamP40630 Gm10290-201ENSMUST00000200451 999 ntBASIC14.02□□□□□ -0.17
TfamP40630 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TfamP40630 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TfamP40630 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TfamP40630 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
TfamP40630 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
TfamP40630 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TfamP40630 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.01□□□□□ -0.17
TfamP40630 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TfamP40630 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.01□□□□□ -0.17
TfamP40630 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.01□□□□□ -0.17
TfamP40630 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.01□□□□□ -0.17
TfamP40630 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.01□□□□□ -0.17
TfamP40630 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TfamP40630 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TfamP40630 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TfamP40630 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TfamP40630 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TfamP40630 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14□□□□□ -0.17
TfamP40630 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14□□□□□ -0.17
TfamP40630 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TfamP40630 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TfamP40630 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14□□□□□ -0.17
TfamP40630 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14□□□□□ -0.17
TfamP40630 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14□□□□□ -0.17
TfamP40630 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14□□□□□ -0.17
TfamP40630 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14□□□□□ -0.17
TfamP40630 Gm6944-201ENSMUST00000182449 1006 ntBASIC14□□□□□ -0.17
TfamP40630 Olfr286-202ENSMUST00000205305 969 ntBASIC14□□□□□ -0.17
TfamP40630 AC155729.1-201ENSMUST00000227758 544 ntBASIC14□□□□□ -0.17
TfamP40630 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14□□□□□ -0.17
TfamP40630 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TfamP40630 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
TfamP40630 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TfamP40630 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TfamP40630 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TfamP40630 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TfamP40630 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TfamP40630 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TfamP40630 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms