Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl12P40224 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Cxcl12P40224 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.78□□□□□ -0.04
Cxcl12P40224 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cxcl12P40224 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.77□□□□□ -0.04
Cxcl12P40224 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Cxcl12P40224 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.77□□□□□ -0.04
Cxcl12P40224 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.77□□□□□ -0.04
Cxcl12P40224 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.77□□□□□ -0.04
Cxcl12P40224 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cxcl12P40224 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cxcl12P40224 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.77□□□□□ -0.05
Cxcl12P40224 Gm15240-201ENSMUST00000118156 720 ntBASIC14.77□□□□□ -0.05
Cxcl12P40224 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.77□□□□□ -0.05
Cxcl12P40224 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.77□□□□□ -0.05
Cxcl12P40224 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Cxcl12P40224 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.77□□□□□ -0.05
Cxcl12P40224 Gm10012-201ENSMUST00000078252 192 ntBASIC14.77□□□□□ -0.05
Cxcl12P40224 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.77□□□□□ -0.05
Cxcl12P40224 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.77□□□□□ -0.05
Cxcl12P40224 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cxcl12P40224 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Gm14723-201ENSMUST00000118686 215 ntBASIC14.76□□□□□ -0.05
Cxcl12P40224 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.76□□□□□ -0.05
Cxcl12P40224 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.76□□□□□ -0.05
Cxcl12P40224 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.76□□□□□ -0.05
Cxcl12P40224 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
Cxcl12P40224 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.76□□□□□ -0.05
Cxcl12P40224 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.76□□□□□ -0.05
Cxcl12P40224 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl12P40224 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cxcl12P40224 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm23931-201ENSMUST00000103842 109 ntBASIC14.75□□□□□ -0.05
Cxcl12P40224 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl12P40224 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.75□□□□□ -0.05
Cxcl12P40224 Gm24644-201ENSMUST00000157114 139 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms