Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC21.34■■□□□ 1.01
Chd1P40201 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1P40201 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Chd1P40201 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chd1P40201 Gm9755-201ENSMUST00000032981 1356 ntBASIC21.34■■□□□ 1.01
Chd1P40201 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC21.33■■□□□ 1.01
Chd1P40201 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Chd1P40201 Gm7857-201ENSMUST00000117957 358 ntBASIC21.33■■□□□ 1.01
Chd1P40201 Gm16479-201ENSMUST00000121706 932 ntBASIC21.33■■□□□ 1.01
Chd1P40201 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Chd1P40201 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chd1P40201 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
Chd1P40201 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd1P40201 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Chd1P40201 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd1P40201 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chd1P40201 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC21.32■■□□□ 1
Chd1P40201 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 CT009718.3-201ENSMUST00000221116 367 ntBASIC21.32■■□□□ 1
Chd1P40201 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Gm24447-201ENSMUST00000083977 338 ntBASIC21.32■■□□□ 1
Chd1P40201 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC21.32■■□□□ 1
Chd1P40201 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Gm27528-202ENSMUST00000222916 2012 ntBASIC21.32■■□□□ 1
Chd1P40201 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Chd1P40201 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Gm14028-201ENSMUST00000117434 479 ntBASIC21.32■■□□□ 1
Chd1P40201 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Mir6927-201ENSMUST00000184494 71 ntBASIC21.32■■□□□ 1
Chd1P40201 Gm37489-201ENSMUST00000191883 159 ntBASIC21.32■■□□□ 1
Chd1P40201 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC21.32■■□□□ 1
Chd1P40201 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chd1P40201 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chd1P40201 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC21.31■■□□□ 1
Chd1P40201 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.31■■□□□ 1
Chd1P40201 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Chd1P40201 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Gm12403-201ENSMUST00000121384 959 ntBASIC21.31■■□□□ 1
Chd1P40201 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC21.31■■□□□ 1
Chd1P40201 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC21.31■■□□□ 1
Chd1P40201 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Gm4335-201ENSMUST00000182581 1004 ntBASIC21.31■■□□□ 1
Chd1P40201 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC21.31■■□□□ 1
Chd1P40201 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC21.31■■□□□ 1
Chd1P40201 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.31■■□□□ 1
Chd1P40201 Gm18630-201ENSMUST00000222109 1397 ntBASIC21.31■■□□□ 1
Chd1P40201 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC21.31■■□□□ 1
Chd1P40201 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC21.3■■□□□ 1
Chd1P40201 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Chd1P40201 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Chd1P40201 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Chd1P40201 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.3■■□□□ 1
Chd1P40201 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chd1P40201 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 Gm12715-201ENSMUST00000121430 1128 ntBASIC21.29■■□□□ 1
Chd1P40201 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC21.29■■□□□ 1
Chd1P40201 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC21.29■■□□□ 1
Chd1P40201 CT573086.1-201ENSMUST00000227202 1074 ntBASIC21.29■■□□□ 1
Chd1P40201 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chd1P40201 AC115735.4-201ENSMUST00000227460 1944 ntBASIC21.29■■□□□ 1
Chd1P40201 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms