Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LdlrP35951 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.39□□□□□ -0.11
LdlrP35951 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.39□□□□□ -0.11
LdlrP35951 Gm44872-201ENSMUST00000207864 420 ntBASIC14.39□□□□□ -0.11
LdlrP35951 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.39□□□□□ -0.11
LdlrP35951 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LdlrP35951 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.39□□□□□ -0.11
LdlrP35951 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LdlrP35951 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.39□□□□□ -0.11
LdlrP35951 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LdlrP35951 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.38□□□□□ -0.11
LdlrP35951 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
LdlrP35951 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.38□□□□□ -0.11
LdlrP35951 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LdlrP35951 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.38□□□□□ -0.11
LdlrP35951 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.38□□□□□ -0.11
LdlrP35951 Gm8749-201ENSMUST00000117737 331 ntBASIC14.38□□□□□ -0.11
LdlrP35951 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.38□□□□□ -0.11
LdlrP35951 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.38□□□□□ -0.11
LdlrP35951 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.38□□□□□ -0.11
LdlrP35951 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.38□□□□□ -0.11
LdlrP35951 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Gm8396-201ENSMUST00000057361 823 ntBASIC14.38□□□□□ -0.11
LdlrP35951 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LdlrP35951 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LdlrP35951 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LdlrP35951 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LdlrP35951 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LdlrP35951 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
LdlrP35951 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LdlrP35951 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LdlrP35951 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LdlrP35951 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.37□□□□□ -0.11
LdlrP35951 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LdlrP35951 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.37□□□□□ -0.11
LdlrP35951 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.37□□□□□ -0.11
LdlrP35951 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Gm9726-201ENSMUST00000180321 678 ntBASIC14.37□□□□□ -0.11
LdlrP35951 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.37□□□□□ -0.11
LdlrP35951 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
LdlrP35951 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LdlrP35951 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LdlrP35951 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LdlrP35951 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LdlrP35951 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
LdlrP35951 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms