Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm22918-201ENSMUST00000103855 110 ntBASIC13.37□□□□□ -0.27
Foxa1P35582 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Foxa1P35582 Gm14042-201ENSMUST00000120139 833 ntBASIC13.37□□□□□ -0.27
Foxa1P35582 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Foxa1P35582 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.37□□□□□ -0.27
Foxa1P35582 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Foxa1P35582 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.37□□□□□ -0.27
Foxa1P35582 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxa1P35582 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Foxa1P35582 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Foxa1P35582 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.36□□□□□ -0.27
Foxa1P35582 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm5867-201ENSMUST00000063197 592 ntBASIC13.36□□□□□ -0.27
Foxa1P35582 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Foxa1P35582 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.36□□□□□ -0.27
Foxa1P35582 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.36□□□□□ -0.27
Foxa1P35582 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxa1P35582 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Foxa1P35582 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Foxa1P35582 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxa1P35582 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
Foxa1P35582 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.35□□□□□ -0.27
Foxa1P35582 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxa1P35582 Gm13015-201ENSMUST00000118674 204 ntBASIC13.35□□□□□ -0.27
Foxa1P35582 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.35□□□□□ -0.27
Foxa1P35582 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Gm9824-201ENSMUST00000178707 561 ntBASIC13.35□□□□□ -0.27
Foxa1P35582 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.35□□□□□ -0.27
Foxa1P35582 Gm5312-201ENSMUST00000203728 547 ntBASIC13.35□□□□□ -0.27
Foxa1P35582 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Foxa1P35582 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.35□□□□□ -0.27
Foxa1P35582 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxa1P35582 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.34□□□□□ -0.27
Foxa1P35582 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxa1P35582 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms