Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sftpa1P35242 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.3□□□□□ -0.28
Sftpa1P35242 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Mir7654-201ENSMUST00000185082 70 ntBASIC13.3□□□□□ -0.28
Sftpa1P35242 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.3□□□□□ -0.28
Sftpa1P35242 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.3□□□□□ -0.28
Sftpa1P35242 Gm45331-201ENSMUST00000209868 554 ntBASIC13.3□□□□□ -0.28
Sftpa1P35242 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sftpa1P35242 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sftpa1P35242 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.29□□□□□ -0.28
Sftpa1P35242 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.29□□□□□ -0.28
Sftpa1P35242 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.29□□□□□ -0.28
Sftpa1P35242 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sftpa1P35242 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.29□□□□□ -0.28
Sftpa1P35242 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.29□□□□□ -0.28
Sftpa1P35242 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sftpa1P35242 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sftpa1P35242 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.28□□□□□ -0.28
Sftpa1P35242 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.28□□□□□ -0.28
Sftpa1P35242 Gm45841-201ENSMUST00000207700 164 ntBASIC13.28□□□□□ -0.28
Sftpa1P35242 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Sftpa1P35242 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.28□□□□□ -0.28
Sftpa1P35242 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sftpa1P35242 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.28□□□□□ -0.28
Sftpa1P35242 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms