Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gm7461-201ENSMUST00000058918 827 ntBASIC12.44□□□□□ -0.42
Slc6a1P31648 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Slc6a1P31648 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Slc6a1P31648 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.44□□□□□ -0.42
Slc6a1P31648 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Grk6-205ENSMUST00000224653 2976 ntBASIC12.43□□□□□ -0.42
Slc6a1P31648 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Gm25406-201ENSMUST00000157599 105 ntBASIC12.43□□□□□ -0.42
Slc6a1P31648 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.43□□□□□ -0.42
Slc6a1P31648 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.43□□□□□ -0.42
Slc6a1P31648 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.43□□□□□ -0.42
Slc6a1P31648 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Slc6a1P31648 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Slc6a1P31648 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms