Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.02□□□□□ -0.17
Hoxc11P31313 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc11P31313 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.02□□□□□ -0.17
Hoxc11P31313 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hoxc11P31313 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hoxc11P31313 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.02□□□□□ -0.17
Hoxc11P31313 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc11P31313 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Gm8410-201ENSMUST00000117225 605 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Gm13453-201ENSMUST00000118708 357 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc11P31313 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Gm27306-201ENSMUST00000183970 107 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.01□□□□□ -0.17
Hoxc11P31313 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc11P31313 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.01□□□□□ -0.17
Hoxc11P31313 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc11P31313 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc11P31313 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc11P31313 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14□□□□□ -0.17
Hoxc11P31313 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc11P31313 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hoxc11P31313 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Gm45605-201ENSMUST00000210265 4269 ntBASIC14□□□□□ -0.17
Hoxc11P31313 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc11P31313 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc11P31313 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc11P31313 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc11P31313 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc11P31313 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc11P31313 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Hoxc11P31313 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms