Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.37□□□□□ -0.27
Nedd8P29595 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.37□□□□□ -0.27
Nedd8P29595 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nedd8P29595 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nedd8P29595 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nedd8P29595 Gm11355-201ENSMUST00000121120 306 ntBASIC13.36□□□□□ -0.27
Nedd8P29595 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.36□□□□□ -0.27
Nedd8P29595 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.36□□□□□ -0.27
Nedd8P29595 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.36□□□□□ -0.27
Nedd8P29595 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.36□□□□□ -0.27
Nedd8P29595 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.36□□□□□ -0.27
Nedd8P29595 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nedd8P29595 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Nedd8P29595 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.36□□□□□ -0.27
Nedd8P29595 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nedd8P29595 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nedd8P29595 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.35□□□□□ -0.27
Nedd8P29595 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.35□□□□□ -0.27
Nedd8P29595 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.35□□□□□ -0.27
Nedd8P29595 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nedd8P29595 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.35□□□□□ -0.27
Nedd8P29595 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nedd8P29595 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nedd8P29595 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.35□□□□□ -0.27
Nedd8P29595 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nedd8P29595 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Nedd8P29595 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Nedd8P29595 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Nedd8P29595 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Gm8344-201ENSMUST00000119813 856 ntBASIC13.34□□□□□ -0.27
Nedd8P29595 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.34□□□□□ -0.27
Nedd8P29595 Gm21559-201ENSMUST00000220638 855 ntBASIC13.34□□□□□ -0.27
Nedd8P29595 Gm8587-201ENSMUST00000076538 843 ntBASIC13.34□□□□□ -0.27
Nedd8P29595 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.34□□□□□ -0.27
Nedd8P29595 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nedd8P29595 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms