Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.22□□□□□ -0.13
Srp54P14576 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Srp54P14576 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Srp54P14576 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Srp54P14576 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Srp54P14576 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.21□□□□□ -0.13
Srp54P14576 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Srp54P14576 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.21□□□□□ -0.13
Srp54P14576 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Srp54P14576 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.21□□□□□ -0.13
Srp54P14576 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Gm14767-201ENSMUST00000121559 586 ntBASIC14.21□□□□□ -0.13
Srp54P14576 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.21□□□□□ -0.13
Srp54P14576 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Mir8102-201ENSMUST00000184148 139 ntBASIC14.21□□□□□ -0.13
Srp54P14576 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.21□□□□□ -0.13
Srp54P14576 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.21□□□□□ -0.13
Srp54P14576 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Srp54P14576 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Srp54P14576 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Srp54P14576 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Srp54P14576 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.21□□□□□ -0.14
Srp54P14576 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Srp54P14576 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Srp54P14576 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.21□□□□□ -0.14
Srp54P14576 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.2□□□□□ -0.14
Srp54P14576 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Srp54P14576 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Srp54P14576 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Srp54P14576 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.2□□□□□ -0.14
Srp54P14576 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.2□□□□□ -0.14
Srp54P14576 Gm27533-201ENSMUST00000183800 152 ntBASIC14.2□□□□□ -0.14
Srp54P14576 Olfr286-202ENSMUST00000205305 969 ntBASIC14.2□□□□□ -0.14
Srp54P14576 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.2□□□□□ -0.14
Srp54P14576 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.2□□□□□ -0.14
Srp54P14576 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Srp54P14576 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Srp54P14576 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Srp54P14576 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54P14576 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Srp54P14576 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54P14576 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54P14576 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54P14576 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Srp54P14576 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms