Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ctla2aP12399 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Gm13312-201ENSMUST00000119631 718 ntBASIC13.02□□□□□ -0.33
Ctla2aP12399 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.02□□□□□ -0.33
Ctla2aP12399 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.02□□□□□ -0.33
Ctla2aP12399 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.02□□□□□ -0.33
Ctla2aP12399 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ctla2aP12399 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ctla2aP12399 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Ctla2aP12399 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.02□□□□□ -0.33
Ctla2aP12399 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Ctla2aP12399 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ctla2aP12399 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ctla2aP12399 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ctla2aP12399 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.01□□□□□ -0.33
Ctla2aP12399 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.01□□□□□ -0.33
Ctla2aP12399 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.01□□□□□ -0.33
Ctla2aP12399 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.01□□□□□ -0.33
Ctla2aP12399 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ctla2aP12399 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.01□□□□□ -0.33
Ctla2aP12399 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.01□□□□□ -0.33
Ctla2aP12399 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.01□□□□□ -0.33
Ctla2aP12399 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ctla2aP12399 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13□□□□□ -0.33
Ctla2aP12399 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Gm45630-201ENSMUST00000210243 1911 ntBASIC13□□□□□ -0.33
Ctla2aP12399 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ctla2aP12399 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13□□□□□ -0.33
Ctla2aP12399 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13□□□□□ -0.33
Ctla2aP12399 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ctla2aP12399 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ctla2aP12399 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ctla2aP12399 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ctla2aP12399 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Ctla2aP12399 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ctla2aP12399 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Ctla2aP12399 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ctla2aP12399 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms