Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Fv4P11370 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.98□□□□□ -0.17
Fv4P11370 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fv4P11370 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Fv4P11370 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.97□□□□□ -0.17
Fv4P11370 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Fv4P11370 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.97□□□□□ -0.17
Fv4P11370 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Fv4P11370 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Fv4P11370 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.97□□□□□ -0.17
Fv4P11370 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.97□□□□□ -0.17
Fv4P11370 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fv4P11370 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Fv4P11370 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.96□□□□□ -0.17
Fv4P11370 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Fv4P11370 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Fv4P11370 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.96□□□□□ -0.17
Fv4P11370 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.96□□□□□ -0.17
Fv4P11370 Gm15483-201ENSMUST00000120338 456 ntBASIC13.96□□□□□ -0.17
Fv4P11370 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Fv4P11370 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.96□□□□□ -0.17
Fv4P11370 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.96□□□□□ -0.17
Fv4P11370 Mzt1-203ENSMUST00000227948 952 ntBASIC13.96□□□□□ -0.17
Fv4P11370 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Fv4P11370 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fv4P11370 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.96□□□□□ -0.18
Fv4P11370 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Fv4P11370 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Fv4P11370 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.95□□□□□ -0.18
Fv4P11370 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Fv4P11370 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Fv4P11370 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Fv4P11370 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.95□□□□□ -0.18
Fv4P11370 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.95□□□□□ -0.18
Fv4P11370 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fv4P11370 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Fv4P11370 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms