Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccl3P10855 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccl3P10855 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl3P10855 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl3P10855 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.72□□□□□ -0.37
Ccl3P10855 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl3P10855 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl3P10855 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl3P10855 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl3P10855 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccl3P10855 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccl3P10855 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccl3P10855 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Mir7654-201ENSMUST00000185082 70 ntBASIC12.71□□□□□ -0.37
Ccl3P10855 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.71□□□□□ -0.37
Ccl3P10855 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.71□□□□□ -0.37
Ccl3P10855 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.71□□□□□ -0.37
Ccl3P10855 BC037039-201ENSMUST00000192003 2205 ntBASIC12.71□□□□□ -0.37
Ccl3P10855 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl3P10855 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccl3P10855 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Ccl3P10855 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccl3P10855 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ccl3P10855 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccl3P10855 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccl3P10855 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl3P10855 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl3P10855 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccl3P10855 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Gm4984-201ENSMUST00000115987 360 ntBASIC12.7□□□□□ -0.38
Ccl3P10855 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Gm4804-201ENSMUST00000182234 999 ntBASIC12.7□□□□□ -0.38
Ccl3P10855 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl3P10855 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl3P10855 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccl3P10855 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl3P10855 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccl3P10855 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl3P10855 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.69□□□□□ -0.38
Ccl3P10855 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccl3P10855 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccl3P10855 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl3P10855 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl3P10855 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Gm9899-201ENSMUST00000065519 555 ntBASIC12.69□□□□□ -0.38
Ccl3P10855 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccl3P10855 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl3P10855 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccl3P10855 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms