Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nid1P10493 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Nid1P10493 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nid1P10493 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nid1P10493 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Nid1P10493 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.54□□□□□ -0.24
Nid1P10493 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.54□□□□□ -0.24
Nid1P10493 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.54□□□□□ -0.24
Nid1P10493 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.54□□□□□ -0.24
Nid1P10493 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.54□□□□□ -0.24
Nid1P10493 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nid1P10493 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nid1P10493 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.53□□□□□ -0.24
Nid1P10493 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.53□□□□□ -0.24
Nid1P10493 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.53□□□□□ -0.24
Nid1P10493 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Nid1P10493 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.53□□□□□ -0.24
Nid1P10493 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
Nid1P10493 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Mir3113-201ENSMUST00000175478 76 ntBASIC13.53□□□□□ -0.24
Nid1P10493 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nid1P10493 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Nid1P10493 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.53□□□□□ -0.24
Nid1P10493 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.53□□□□□ -0.24
Nid1P10493 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nid1P10493 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nid1P10493 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nid1P10493 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nid1P10493 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.52□□□□□ -0.24
Nid1P10493 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.52□□□□□ -0.24
Nid1P10493 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nid1P10493 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nid1P10493 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nid1P10493 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.52□□□□□ -0.25
Nid1P10493 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.52□□□□□ -0.25
Nid1P10493 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.52□□□□□ -0.25
Nid1P10493 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.52□□□□□ -0.25
Nid1P10493 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nid1P10493 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nid1P10493 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nid1P10493 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nid1P10493 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms