Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UbbP0CG49 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
UbbP0CG49 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UbbP0CG49 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
UbbP0CG49 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
UbbP0CG49 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.39
UbbP0CG49 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UbbP0CG49 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.58□□□□□ -0.4
UbbP0CG49 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Gm8749-201ENSMUST00000117737 331 ntBASIC12.58□□□□□ -0.4
UbbP0CG49 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.58□□□□□ -0.4
UbbP0CG49 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UbbP0CG49 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UbbP0CG49 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UbbP0CG49 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
UbbP0CG49 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
UbbP0CG49 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.57□□□□□ -0.4
UbbP0CG49 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.57□□□□□ -0.4
UbbP0CG49 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
UbbP0CG49 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.57□□□□□ -0.4
UbbP0CG49 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
UbbP0CG49 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
UbbP0CG49 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
UbbP0CG49 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms