Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LtaP09225 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LtaP09225 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.82□□□□□ -0.52
LtaP09225 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.82□□□□□ -0.52
LtaP09225 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LtaP09225 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LtaP09225 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.82□□□□□ -0.52
LtaP09225 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LtaP09225 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LtaP09225 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LtaP09225 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
LtaP09225 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
LtaP09225 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LtaP09225 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LtaP09225 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.81□□□□□ -0.52
LtaP09225 Gm13616-201ENSMUST00000120600 222 ntBASIC11.81□□□□□ -0.52
LtaP09225 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.81□□□□□ -0.52
LtaP09225 Gm25948-201ENSMUST00000175334 112 ntBASIC11.81□□□□□ -0.52
LtaP09225 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.81□□□□□ -0.52
LtaP09225 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.81□□□□□ -0.52
LtaP09225 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.81□□□□□ -0.52
LtaP09225 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.81□□□□□ -0.52
LtaP09225 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.81□□□□□ -0.52
LtaP09225 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LtaP09225 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
LtaP09225 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
LtaP09225 Gm15920-201ENSMUST00000118998 402 ntBASIC11.8□□□□□ -0.52
LtaP09225 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.8□□□□□ -0.52
LtaP09225 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.8□□□□□ -0.52
LtaP09225 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.8□□□□□ -0.52
LtaP09225 Gm5779-201ENSMUST00000218467 910 ntBASIC11.8□□□□□ -0.52
LtaP09225 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.8□□□□□ -0.52
LtaP09225 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.8□□□□□ -0.52
LtaP09225 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
LtaP09225 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
LtaP09225 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LtaP09225 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms