Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
P01788 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.44□□□□□ -0.58
P01788 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.44□□□□□ -0.58
P01788 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
P01788 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P01788 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.44□□□□□ -0.58
P01788 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.44□□□□□ -0.58
P01788 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Birc2-201ENSMUST00000054878 378 ntBASIC11.44□□□□□ -0.58
P01788 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P01788 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
P01788 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
P01788 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01788 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01788 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01788 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
P01788 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
P01788 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.43□□□□□ -0.58
P01788 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.43□□□□□ -0.58
P01788 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.43□□□□□ -0.58
P01788 Gm8749-201ENSMUST00000117737 331 ntBASIC11.43□□□□□ -0.58
P01788 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Gm27459-201ENSMUST00000184860 107 ntBASIC11.43□□□□□ -0.58
P01788 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.43□□□□□ -0.58
P01788 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
P01788 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
P01788 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
P01788 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.43□□□□□ -0.58
P01788 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01788 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.42□□□□□ -0.58
P01788 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.42□□□□□ -0.58
P01788 Gm13464-201ENSMUST00000119418 935 ntBASIC11.42□□□□□ -0.58
P01788 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.42□□□□□ -0.58
P01788 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01788 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Gm6550-201ENSMUST00000187574 993 ntBASIC11.42□□□□□ -0.58
P01788 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.42□□□□□ -0.58
P01788 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
P01788 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
P01788 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.42□□□□□ -0.58
P01788 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.42□□□□□ -0.58
P01788 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
P01788 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01788 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms