Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
P01728 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.33□□□□□ -0.6
P01728 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.33□□□□□ -0.6
P01728 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
P01728 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.33□□□□□ -0.6
P01728 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01728 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01728 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.32□□□□□ -0.6
P01728 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.32□□□□□ -0.6
P01728 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P01728 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.32□□□□□ -0.6
P01728 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
P01728 Gm12895-201ENSMUST00000122214 226 ntBASIC11.32□□□□□ -0.6
P01728 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.32□□□□□ -0.6
P01728 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.32□□□□□ -0.6
P01728 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.32□□□□□ -0.6
P01728 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.32□□□□□ -0.6
P01728 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01728 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.32□□□□□ -0.6
P01728 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.32□□□□□ -0.6
P01728 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P01728 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.32□□□□□ -0.6
P01728 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01728 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.32□□□□□ -0.6
P01728 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.31□□□□□ -0.6
P01728 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01728 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.31□□□□□ -0.6
P01728 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01728 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.31□□□□□ -0.6
P01728 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.31□□□□□ -0.6
P01728 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms