Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Vti1aO89116 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Vti1aO89116 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.58■□□□□ 0.09
Vti1aO89116 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.58■□□□□ 0.09
Vti1aO89116 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vti1aO89116 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.58■□□□□ 0.08
Vti1aO89116 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.58■□□□□ 0.08
Vti1aO89116 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Vti1aO89116 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Vti1aO89116 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.58■□□□□ 0.08
Vti1aO89116 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Vti1aO89116 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.58■□□□□ 0.08
Vti1aO89116 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Vti1aO89116 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.58■□□□□ 0.08
Vti1aO89116 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.58■□□□□ 0.08
Vti1aO89116 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vti1aO89116 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.57■□□□□ 0.08
Vti1aO89116 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm7730-201ENSMUST00000212486 454 ntBASIC15.57■□□□□ 0.08
Vti1aO89116 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Vti1aO89116 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.57■□□□□ 0.08
Vti1aO89116 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Vti1aO89116 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Vti1aO89116 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Vti1aO89116 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vti1aO89116 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Vti1aO89116 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.56■□□□□ 0.08
Vti1aO89116 Gm16215-201ENSMUST00000161990 637 ntBASIC15.56■□□□□ 0.08
Vti1aO89116 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.56■□□□□ 0.08
Vti1aO89116 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.56■□□□□ 0.08
Vti1aO89116 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.56■□□□□ 0.08
Vti1aO89116 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Syt7-205ENSMUST00000224135 1557 ntBASIC15.56■□□□□ 0.08
Vti1aO89116 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Vti1aO89116 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Vti1aO89116 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.55■□□□□ 0.08
Vti1aO89116 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Vti1aO89116 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Vti1aO89116 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.55■□□□□ 0.08
Vti1aO89116 Gm12134-201ENSMUST00000122109 520 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms