Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Hcn1O88704 Gm27702-201ENSMUST00000184512 56 ntBASIC13.87□□□□□ -0.19
Hcn1O88704 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.87□□□□□ -0.19
Hcn1O88704 Gm2756-201ENSMUST00000195851 400 ntBASIC13.87□□□□□ -0.19
Hcn1O88704 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.87□□□□□ -0.19
Hcn1O88704 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hcn1O88704 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.87□□□□□ -0.19
Hcn1O88704 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Hcn1O88704 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.86□□□□□ -0.19
Hcn1O88704 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.86□□□□□ -0.19
Hcn1O88704 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Hcn1O88704 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Hcn1O88704 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Gm15427-201ENSMUST00000117288 531 ntBASIC13.86□□□□□ -0.19
Hcn1O88704 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.86□□□□□ -0.19
Hcn1O88704 Gm16198-201ENSMUST00000118766 670 ntBASIC13.86□□□□□ -0.19
Hcn1O88704 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.86□□□□□ -0.19
Hcn1O88704 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.86□□□□□ -0.19
Hcn1O88704 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Hcn1O88704 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Gm2272-201ENSMUST00000194903 582 ntBASIC13.86□□□□□ -0.19
Hcn1O88704 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.86□□□□□ -0.19
Hcn1O88704 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Hcn1O88704 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Hcn1O88704 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Hcn1O88704 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.86□□□□□ -0.19
Hcn1O88704 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.86□□□□□ -0.19
Hcn1O88704 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hcn1O88704 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.85□□□□□ -0.19
Hcn1O88704 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.85□□□□□ -0.19
Hcn1O88704 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.85□□□□□ -0.19
Hcn1O88704 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Hcn1O88704 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.85□□□□□ -0.19
Hcn1O88704 Gm5867-201ENSMUST00000063197 592 ntBASIC13.85□□□□□ -0.19
Hcn1O88704 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hcn1O88704 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.85□□□□□ -0.19
Hcn1O88704 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hcn1O88704 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Hcn1O88704 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Hcn1O88704 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Hcn1O88704 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hcn1O88704 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms