Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.6■□□□□ 0.41
Cops6O88545 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops6O88545 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cops6O88545 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cops6O88545 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.59■□□□□ 0.41
Cops6O88545 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.59■□□□□ 0.41
Cops6O88545 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cops6O88545 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cops6O88545 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.59■□□□□ 0.41
Cops6O88545 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.59■□□□□ 0.41
Cops6O88545 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.59■□□□□ 0.41
Cops6O88545 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.59■□□□□ 0.41
Cops6O88545 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Cops6O88545 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cops6O88545 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops6O88545 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops6O88545 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.58■□□□□ 0.41
Cops6O88545 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cops6O88545 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cops6O88545 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.58■□□□□ 0.4
Cops6O88545 Mir6392-201ENSMUST00000184924 108 ntBASIC17.58■□□□□ 0.4
Cops6O88545 Gm21470-201ENSMUST00000187680 696 ntBASIC17.58■□□□□ 0.4
Cops6O88545 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.58■□□□□ 0.4
Cops6O88545 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cops6O88545 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cops6O88545 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.58■□□□□ 0.4
Cops6O88545 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cops6O88545 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cops6O88545 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.57■□□□□ 0.4
Cops6O88545 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.57■□□□□ 0.4
Cops6O88545 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.57■□□□□ 0.4
Cops6O88545 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cops6O88545 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.56■□□□□ 0.4
Cops6O88545 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cops6O88545 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.56■□□□□ 0.4
Cops6O88545 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.56■□□□□ 0.4
Cops6O88545 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.56■□□□□ 0.4
Cops6O88545 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.56■□□□□ 0.4
Cops6O88545 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.56■□□□□ 0.4
Cops6O88545 Gm45384-201ENSMUST00000210451 277 ntBASIC17.56■□□□□ 0.4
Cops6O88545 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cops6O88545 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cops6O88545 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.56■□□□□ 0.4
Cops6O88545 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cops6O88545 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cops6O88545 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms