Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.36□□□□□ -0.27
Cops4O88544 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cops4O88544 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.36□□□□□ -0.27
Cops4O88544 Gm4535-201ENSMUST00000182274 558 ntBASIC13.36□□□□□ -0.27
Cops4O88544 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.36□□□□□ -0.27
Cops4O88544 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.36□□□□□ -0.27
Cops4O88544 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Gm10355-201ENSMUST00000097146 517 ntBASIC13.36□□□□□ -0.27
Cops4O88544 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.36□□□□□ -0.27
Cops4O88544 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.36□□□□□ -0.27
Cops4O88544 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.36□□□□□ -0.27
Cops4O88544 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cops4O88544 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cops4O88544 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cops4O88544 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cops4O88544 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Gm27646-201ENSMUST00000183989 110 ntBASIC13.35□□□□□ -0.27
Cops4O88544 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Cops4O88544 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cops4O88544 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cops4O88544 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cops4O88544 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.34□□□□□ -0.27
Cops4O88544 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.34□□□□□ -0.27
Cops4O88544 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.34□□□□□ -0.27
Cops4O88544 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.34□□□□□ -0.27
Cops4O88544 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.34□□□□□ -0.27
Cops4O88544 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.34□□□□□ -0.27
Cops4O88544 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.34□□□□□ -0.27
Cops4O88544 Gm6296-201ENSMUST00000222599 943 ntBASIC13.34□□□□□ -0.27
Cops4O88544 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.34□□□□□ -0.27
Cops4O88544 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cops4O88544 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.34□□□□□ -0.27
Cops4O88544 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cops4O88544 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops4O88544 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cops4O88544 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cops4O88544 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cops4O88544 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cops4O88544 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cops4O88544 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops4O88544 Gm28033-201ENSMUST00000184224 96 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms