Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm18766-201ENSMUST00000189811 808 ntBASIC14.28□□□□□ -0.12
Pdlim1O70400 Gm44333-201ENSMUST00000197168 107 ntBASIC14.28□□□□□ -0.12
Pdlim1O70400 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pdlim1O70400 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.28□□□□□ -0.12
Pdlim1O70400 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.28□□□□□ -0.12
Pdlim1O70400 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pdlim1O70400 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim1O70400 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim1O70400 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pdlim1O70400 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.27□□□□□ -0.12
Pdlim1O70400 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim1O70400 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim1O70400 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Gm5566-201ENSMUST00000116118 459 ntBASIC14.27□□□□□ -0.13
Pdlim1O70400 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.27□□□□□ -0.13
Pdlim1O70400 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pdlim1O70400 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim1O70400 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.27□□□□□ -0.13
Pdlim1O70400 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.26□□□□□ -0.13
Pdlim1O70400 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.26□□□□□ -0.13
Pdlim1O70400 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Gm5779-201ENSMUST00000218467 910 ntBASIC14.26□□□□□ -0.13
Pdlim1O70400 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pdlim1O70400 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdlim1O70400 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms