Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.38□□□□□ -0.11
Ldb2O55203 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.38□□□□□ -0.11
Ldb2O55203 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ldb2O55203 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb2O55203 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ldb2O55203 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ldb2O55203 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.37□□□□□ -0.11
Ldb2O55203 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ldb2O55203 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.37□□□□□ -0.11
Ldb2O55203 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.37□□□□□ -0.11
Ldb2O55203 Gm44335-201ENSMUST00000196879 141 ntBASIC14.37□□□□□ -0.11
Ldb2O55203 Gm44297-201ENSMUST00000198304 141 ntBASIC14.37□□□□□ -0.11
Ldb2O55203 Gm44346-201ENSMUST00000198851 141 ntBASIC14.37□□□□□ -0.11
Ldb2O55203 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Chchd1-203ENSMUST00000224633 557 ntBASIC14.37□□□□□ -0.11
Ldb2O55203 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ldb2O55203 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.37□□□□□ -0.11
Ldb2O55203 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Ldb2O55203 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ldb2O55203 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb2O55203 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.36□□□□□ -0.11
Ldb2O55203 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.36□□□□□ -0.11
Ldb2O55203 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.36□□□□□ -0.11
Ldb2O55203 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ldb2O55203 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb2O55203 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms